BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014C06SP1|AL426661
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1641 711 0.0
3x_Contig947 508 e-144
>3x_Contig1641
Length = 13261
Score = 711 bits (358), Expect = 0.0
Identities = 360/362 (99%)
Strand = Plus / Minus
Query: 1 atagcggattcgacaaattcgacagacttggcgaagttgttcttccagatgtttctaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atagcggattcgacaaattcgacagacttggcgaagttgttcttccagatgtttctaccg 303
Query: 61 tcaacgataccaacggacaaagtttgcttgtcgttcaaaatggagataacatcgttcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcaacgataccaacggacaaagtttgcttgtcgttcaaaatggagataacatcgttcaat 243
Query: 121 tgttcagggtttctaacgaaatcgaaatggaaaccagcaactggcaagttcttcaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgttcagggtttctaacgaaatcgaaatggaaaccagcaactggcaagttcttcaaagca 183
Query: 181 gccaaatttggaacaacggtaccgaagtaagaagcaacagtgatttctggtagaccttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gccaaatttggaacaacggtaccgaagtaagaagcaacagtgatttctggtagaccttct 123
Query: 241 tgagaagccaagaaagtgtaagcyttgttgaaagcagcytggacttcggctggtagatcc 300
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 122 tgagaagccaagaaagtgtaagctttgttgaaagcagcttggacttcggctggtagatcc 63
Query: 301 aaaaccaaagttggttcatccaattgaacggatttagcaccagcatcagccaatttcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaaaccaaagttggttcatccaattgaacggatttagcaccagcatcagccaatttcttc 3
Query: 361 aa 362
||
Sbjct: 2 aa 1
>3x_Contig947
Length = 3468
Score = 508 bits (256), Expect = e-144
Identities = 256/256 (100%)
Strand = Plus / Minus
Query: 552 agagttagagaaggttggtctgacataatggtagttggagtcaaaccatttaaccatttc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3468 agagttagagaaggttggtctgacataatggtagttggagtcaaaccatttaaccatttc 3409
Query: 612 caaagctggcacatcaacagcagcagtggtttcggtagcctttctttgcaaacctctagc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 caaagctggcacatcaacagcagcagtggtttcggtagcctttctttgcaaacctctagc 3349
Query: 672 catagcaaagtaagtgtccaatggagacaattcatacttagagtaacgttgtgggataac 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 catagcaaagtaagtgtccaatggagacaattcatacttagagtaacgttgtgggataac 3289
Query: 732 gttgaacaatagagaaagatccaagacttgatcgtagaaagagaaatcgttggaagcaat 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3288 gttgaacaatagagaaagatccaagacttgatcgtagaaagagaaatcgttggaagcaat 3229
Query: 792 gacattgacaccagca 807
||||||||||||||||
Sbjct: 3228 gacattgacaccagca 3213
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7353
Number of Sequences: 1807
Number of extensions: 7353
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)